Example
Route choice
Strain Design
Engineering a microbial chassis to produce a target chemical. Carbon flux routes through aerobic TCA (high yield, expensive O₂) or overflow fermentation (cheap, lower yield). Both converge at product recovery.
Decision logic
Compare alternative production paths and see which route wins under shared yield, budget, and emissions constraints.
Decision question
Which metabolic route should we run if we care about yield, budget, and emissions at the same time?
Model output
Recommended routeAerobic until O₂ caps
Best achievable yield4.8 mmol/gDW/hr
Flip point+1 aeration step makes aerobic dominant
Active limits
- Aeration capped
- Media budget 88% used
Key insight
Aerobic wins on yield, overflow stays cheaper and more flexible, and the recommendation flips only when aeration expands.
Aerobic route leads on yield, but only while aeration can support it.
Overflow stays available as the lower-yield fallback when O₂ is constrained.
Expand aeration and the route choice becomes obvious.